PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004508802.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 229aa    MW: 25358.6 Da    PI: 8.3405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004508802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.7e-10110157455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_004508802.1 110 SHSLAERARREKISVRMKILQDLVPGC----NKVIGKALVLDEIINYIHSLQ 157
                     8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.52E-10104161No hitNo description
SuperFamilySSF474591.7E-17104176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-17106177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.002106156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-7110157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-9112162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MEAPLVNDST FSSTNPSLSE IWPFPLHHSY YNSHFSPQQY NNNNNNECGS GTTKHIKLGS  60
SVSDDKKATS IAAQQEEKQN AKPSCDVAVP VPPKQDYIHV RARRGQATDS HSLAERARRE  120
KISVRMKILQ DLVPGCNKVI GKALVLDEII NYIHSLQHQV EFLSMKLEAL NSRFNMHPAI  180
DCFPSKEVGA QPFDLSGIIF GPQAGRGYAQ GSQPGWLHMQ IAGGFNKSM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311241e-120KT031124.1 Glycine max clone HN_CCL_216 bHLH transcription factor (Glyma17g10290.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004508802.11e-174PREDICTED: transcription factor bHLH79 isoform X1
SwissprotQ9LV174e-58BH079_ARATH; Transcription factor bHLH79
TrEMBLA0A0B2QES41e-109A0A0B2QES4_GLYSO; Transcription factor bHLH79
TrEMBLI1MTN21e-109I1MTN2_SOYBN; BHLH transcription factor
STRINGGLYMA17G10290.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-69BIG PETAL P